qsiprep.workflows.recon.base module

qsiprep base reconstruction workflows

qsiprep.workflows.recon.base.init_qsirecon_wf()[source]

This workflow organizes the execution of qsirecon, with a sub-workflow for each subject.

(Source code)

Parameters

qsiprep.workflows.recon.base.init_qsirecon_wf()[source]

This workflow organizes the execution of qsirecon, with a sub-workflow for each subject.

(Source code)

Parameters

qsiprep.workflows.recon.base.init_single_subject_recon_wf(subject_id)[source]

This workflow organizes the reconstruction pipeline for a single subject. Reconstruction is performed using a separate workflow for each dwi series.

Parameters

subject_idstr

Single subject label

qsiprep.workflows.recon.base.spec_needs_to_template_transform(recon_spec)[source]

Determine whether a recon spec needs a transform from T1wACPC to a template.